Peer-Reviewed Publications

Y Xin, M Cereda, H Hamedani, K Martin, N Tustison, M Pourfathi, S Kadlecek, S Siddiqui, F Amzajerdian, M Connell, N Abate, A Kajanaku, I Duncan, J Gee, R Rizi. Positional Therapy and Regional Pulmonary Ventilation: High-resolution Alignment of Prone and Supine Computed Tomography Images in a Large Animal Model. Anesthesiology. November 2020 (link).

M Pourfathi, Y Xin, M Rosalino, M Cereda, S Kadlecek, I Duncan, H Profka, H Hamedani, S Siddiqui, K Ruppert, S Chatterjee, R Rizi. Pulmonary pyruvate metabolism as an index of inflammation and injury in a rat model of acute respiratory distress syndrome. NMR in Biomedicine. July 2020 (link).

N Perkons, R Kiefer, M Noji, M Pourfathi, D Ackerman, S Siddiqui, D Tischfield, E Profka, O Johnson, S Pickup, A Mancuso, A Pantel, M Denburg, G Nadolski, S Hunt, E Furth, S Kadlecek, T Gade. Hyperpolarized metabolic imaging detects latent hepatocellular carcinoma domains surviving locoregional therapy. Hepatology. September 2019 (link).

S Siddiqui, A Habertheuer, Y Xin, M Pourfathi, J Tao, H Hamedani, S Kadlecek, I Duncan, P Vallabhajosyula, A Naji, S Chatterjee, R Rizi. Detection of lung transplant rejection in a rat model using hyperpolarized [1-13C] pyruvate based metabolic imaging. NMR in Biomedicine. May 2019 (link).

T Achekzai, H Hamedani, S Kadlecek, K Ruppert, Y Xin, R Baron, I Duncan, F Sertic, S Siddiqui, M Pourfathi, L Loza, M Cereda, R Rizi. Multi-breath hyperpolarized 3He imaging scheme to measure alveolar oxygen tension, apparent diffusion coefficient. Academic Radiology. March 2019 (link).

K Ruppert, F Amzajerdian, H Hamedani, Y Xin, L Loza, T Achekzai, I Duncan, H Profka, S Siddiqui, M Pourfathi, M Cereda, S Kadlecek, R Rizi. Assessment of Flip Angle – TR Equivalence for Standardized Dissolved-Phase Imaging of the Lung with Hyperpolarized 129Xe MRI. Magnetic Resonance in Medicine. October 2018 (link)

R Baron, H Hamedani, H Hamedani, S Kadlecek, I Duncan, Y Xin, S Siddiqui, M Pourfathi, M Cereda, R Rizi. A model for predicting future FEV1 decline in smokers using hyperpolarized 3He Magnetic Resonance Imaging. Academic Radiology. August 2018 (link)

K Ruppert, H Hamedani, F Amzajerdian, Y Xin, I Duncan, H Profka, S Siddiqui, M Pourfathi, S Kadlecek, R Rizi. Assessment of Pulmonary Gas Transport in Rabbits Using Hyperpolarized Xenon-129 Magnetic Resonance Imaging. Scientific Reports. May. 2018. (link)

K Ruppert, F Amzajerdian, H Hamedani, Y Xin, L Loza, T Achekzai, I Duncan, H Profka, S Siddiqui, M Pourfathi, M Cereda, S Kadlecek, R Rizi. Rapid Assessment of Pulmonary Gas Transport with Hyperpolarized 129Xe MRI Using a 3D Radial Double Golden Means Acquisition with Variable Flip Angles. Magnetic Resonance in Medicine. April 2018. (link)

A Habertheuer, L Korutla, S Rostami, S Siddiqui, Y Xin, R Rizi, A Naji, P Zielinski, R Hu, T Ochiya, P Vallabhajosyula. Donor Lung Specific Exosome Profiles for Noninvasive Monitoring of Acute Rejection in a Rat Orthotopic Left Lung Transplant Model. The Journal of Heart and Lung Transplantation. April 2018 (link).

M Pourfathi, M Cereda, S Chatterjee, Y Xin, S Kadlecek, I Duncan, H Hamedani, S Siddiqui, H Profka, J Ehrich, S Siddiqui, K Ruppert, R Rizi. Lung Metabolism and Inflammation during Mechanical Ventilation; An Imaging Approach. Scientific Reports. February 2018 (link)

Y Xin, M Cereda, H Hamedani, M Pourfathi, S Siddiqui, N Meeder, S Kadlecek, I Duncan, H Profka, J Rajaei, N Tustison, J Gee, B Kavanagh, R Rizi, Unstable Inflation Causing Injury: Insight from Prone Position and Paired CT Scans. American Journal of Respiratory and Critical Care Medicine. February 2018 (link)

M Pourfathi, Y Xin, S Kadlecek, M Cereda, H Profka, H Hamedani, S Siddiqui, K Ruppert, N Drachman, J Rajaei, R Rizi. In vivo imaging of the progression of acute lung injury using hyperpolarized [1‐13C] pyruvate. Magnetic Resonance in Medicine. January 2017 (link)

H Hamedani, S Kadlecek, Y Xin, S Siddiqui, H Gatens, J Naji, M Ishii, M Cereda, M Rossman, R Rizi.A hybrid multibreath wash‐in wash‐out lung function quantification scheme in human subjects using hyperpolarized 3He MRI for simultaneous assessment of specific ventilation, alveolar oxygen tension, oxygen uptake, and air trapping. Magnetic Resonance in Medicine. October 2016 (link)

S Siddiqui, S Kadlecek, M Pourfathi, Y Xin, W Manneherz, H Hamedani, N Drachman, K Ruppert, J Clapp, R Rizi. The use of hyperpolarized carbon-13 magnetic resonance for molecular imaging. Advanced Drug Delivery Reviews. September 2016 (link)

H Hamedani, J Clapp, S Kadlecek, K Emami, M Ishii, W Gefter, Y Xin, M Cereda, H Shaghaghi, S Siddiqui, M Rossman, R Rizi. Regional Fractional Ventilation by Using Multibreath Wash-in 3He MR Imaging. Radiology. January 2016 (link)

H Shaghaghi, S Kadlecek, S Siddiqui, M Pourfathi, H Hamedani, J Clapp, H Profka, R Rizi. Ascorbic acid prolongs the viability and stability of isolated perfused lungs: A mechanistic study using 31P and hyperpolarized 13C NMR . Free Radical Biology and Medicine. December 2015 (link)

J Clapp, H Hamedani, S Kadleck, Y Xin, H Shaghaghi, S Siddiqui, M Rossman, R Rizi. Multibreath alveolar oxygen tension imaging. Magnetic Resonance in Medicine. October 2015 (link)

H Hamedani, H Shaghaghi, S Kadlecek, Y Xin, B Han, S Siddiqui, J Rajaei, M Ishii, M Rossman, R Rizi. Vertical gradients in regional alveolar oxygen tension in supine human lung imaged by hyperpolarized 3He MRI. NMR in Biomedicine. November 2014 (link)

S Kadlecek, H Shaghaghi, S Siddiqui, H Profka, M Pourfathi, R Rizi. The effect of exogenous substrate concentrations on true and apparent metabolism of hyperpolarized pyruvate in the isolated perfused lung. NMR in Biomedicine. October 2014 (link)

H Shaghaghi, S Kadlecek, C Deshpande, S Siddiqui, D Martinez, M Pourfathi, H Hamedani, M Ishii, H Profka, R Rizi. Metabolic spectroscopy of inflammation in a bleomycin-induced lung injury model using hyperpolarized 1-13C pyruvate. NMR in Biomedicine. May 2014 (link).

S Siddiqui, Y Xin, K Emami, J D'Armiento, T Shiomi, H Profka, P Mongkolwisetwara, R Rizi. Hyperpolarized 3He Diffusion MRI and Histology of Secreted Frizzled Related Protein-1 (SFRP1) Deficient Lungs in a Murine Model. Magnetic Resonance Imaging. February 2014 (link).

A Agarwal, S Kumar, J Narang, L Schultz, T Mikkelsen, S Wang, S Siddiqui, H Poptani, R Jain. Morphologic MRI features, diffusion tensor imaging and radiation dosimetric analysis to differentiate pseudo-progression from early tumor progression. Journal of Neuro-Oncology. February 2013 (link).

GJ Kazakia, D Kuo, J Schooler, S Siddiqui, S Shanbhag, G Bernstein, A Horvai, S Majumdar, M Ries, X Li. Bone and cartilage demonstrate changes localized to bone marrow edema-like lesions within osteoarthritic knees. Osteoarthritis and Cartilage. September 2012 (link).

C McMillan, C Brun, S Siddiqui, M Churgin, D Libon, P Yushkevich, H Zhang, A Boller, J Gee, M Grossman.The Contribution of White Matter Neuroimaging to Multimodal Diagnosis of Frontotemporal Lobar Degeneration. Neurology. April 2012 (link).

E Jones, D Miller, H Wahnishe, J Schooler, S Siddiqui, X Li. Characterization of Human Osteoarthritic Cartilage Using Optical and Magnetic Resonance Imaging. Molecular Imaging and Biology. February 2012 (link).

K Shet, S Siddiqui (co-first author), H Yoshihara, J Kurhanewicz, M Ries, X Li. High-resolution magic angle spinning NMR spectroscopy of human osteoarthritic cartilage. NMR Biomed. August 2011 (link).

Conferences



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